Package: bennu 0.3.1

bennu: Bayesian Estimation of Naloxone Kit Number Under-Reporting

Bayesian model and associated tools for generating estimates of total naloxone kit numbers distributed and used from naloxone kit orders data. Provides functions for generating simulated data of naloxone kit use and functions for generating samples from the posterior.

Authors:Mike Irvine [aut, cre, cph], Samantha Bardwell [ctb], Andrew Johnson [ctb]

bennu_0.3.1.tar.gz
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manual.pdf |manual.html✨
card.svg |card.png
bennu/json (API)
NEWS

# Install 'bennu' in R:

install.packages('bennu', repos = c('https://sempwn.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/sempwn/bennu/issues

Pkgdown/docs site:https://sempwn.github.io

Uses libs:

c++– GNU Standard C++ Library v3

Datasets:

experimental_validation_data - Experimental validation results
missing_data_validation - Missing data experimental validation results

On CRAN:

bayesian-data-analysis naloxone stan cpp

5.02 score 4 stars 13 scripts 230 downloads 7 exports 60 dependencies

Last updated from:44e3cee418. Checks:12 OK, 1 FAIL. Indexed: yes.

Target	Result	Time
linux-devel-arm64	OK	296
linux-devel-x86_64	OK	294
source / vignettes	OK	341
linux-release-arm64	OK	277
linux-release-x86_64	OK	298
macos-release-arm64	OK	296
macos-release-x86_64	OK	486
macos-oldrel-arm64	OK	303
macos-oldrel-x86_64	OK	414
windows-devel	OK	299
windows-release	OK	417
windows-oldrel	OK	345
wasm-release	FAIL	168

Exports:%>%est_naloxone est_naloxone_vec generate_model_data kit_summary_table model_random_walk_data plot_kit_use

Dependencies:abind arrayhelpers backports BH callr checkmate cli coda cpp11 desc distributional dplyr farver generics ggdist ggplot2 glue gridExtra gtable inline isoband labeling lattice lifecycle loo magrittr matrixStats numDeriv pillar pkgbuild pkgconfig posterior processx ps purrr quadprog QuickJSR R6 RColorBrewer Rcpp RcppEigen RcppParallel rlang rstan rstantools S7 scales StanHeaders stringi stringr svUnit tensorA tibble tidybayes tidyr tidyselect utf8 vctrs viridisLite withr

Introduction

Rendered fromIntroduction.Rmdusingknitr::rmarkdownon May 06 2026.

Last update: 2024-03-14
Started: 2023-01-03

Simulation Validation Experiments

Rendered fromsimulation_validation_experiments.Rmdusingknitr::rmarkdownon May 06 2026.

Last update: 2024-04-19
Started: 2024-04-19

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
The 'bennu' package.	bennu-package bennu
Run Bayesian estimation of naloxone number under-reporting	est_naloxone
Run Bayesian estimation of naloxone number under-reporting	est_naloxone_vec
Experimental validation results	experimental_validation_data
generate model data for testing purposes	generate_model_data
Summarize model fit	kit_summary_table
Missing data experimental validation results	missing_data_validation
generate model data for testing purposes	model_random_walk_data
Plot of probability of naloxone kit use	plot_kit_use